Did you ever try creating makefiles from FlowStudio? In a simple case, you just need to add the needed files to your project through the GUI and press the hammer.

FlowStudio maintains an xprj file with all information related to the project and then creates a makefile every time you want to build. You probably want to do something similar in your tool. In fact, there is also a small commandline tool that can create a makefile from an xprj. I don't remember if we include it in the SDK but if not, we could I guess.


/Nicholai